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Publication - Mr Vittorio Bartoli

    Automated Visualization of Genetic Designs Using DNAplotlib

    Citation

    Bartoli, V, Dixon, D & Gorochowski, T, 2018, ‘Automated Visualization of Genetic Designs Using DNAplotlib’. in: Jeff Braman (eds) Synthetic Biology: Methods and Protocols. Humana Press, pp. 399-409

    Abstract

    Visualization of complex genetic systems can help efficiently communicate important design features and clearly illustrate overall structures. To aid in the creation of such diagrams, standards like the Synthetic Biology Open Language Visual (SBOLv) have been established to ensure that specific symbols and shapes convey the same meaning for genetic parts across the field. Here, we describe several ways that the computational tool DNAplotlib can be used to automate the generation of SBOLv standard-compliant diagrams covering simple genetic designs to large libraries of genetic constructs.

    Full details in the University publications repository